| Organization | Department & Ministry | Institution Type | State |
|---|---|---|---|
| National Institute of Tuberculosis and Respiratory Diseases (NITRD) | Ministry of Agriculture and Farmers Welfare (MoAFW) | — | Delhi |
| National Institute of Urban Affairs (NIUA) | Ministry of Consumer Affairs, Food & Public Distribution | — | Delhi |
| National Institute of Veterinary Epidemiology and Disease Informatics (NIVEDI) | Ministry of Agriculture and Farmers Welfare (MoAFW) | — | Karnataka |
| National Institute of Virology (NIV) | Ministry of Health and Family Welfare (MoHFW) | Research Institutions | Maharashtra |
| National Institute of Wind Energy (NIWE), Chennai | Ministry of New and Renewable Energy (MNRE) | Research Institutions | Tamil Nadu |
| National Internet Exchange of India (NIXI), New Delhi | Ministry of Electronics & Info. Tech (MeitY) | Research Institutions | Delhi |
| National JALMA Institute for Leprosy & Other Mycobacterial Diseases (NJILOMD), Agra | Ministry of Health and Family Welfare (MoHFW) | Research Institutions | Uttar Pradesh |
| National Metallurgical Laboratory (NML) | Ministry of Science & Technology (MoST) | — | Jharkhand |
| National Museum of Natural History (NMNH) | Ministry of Environment, Forest & Climate Change (MoEFCC) | — | Delhi |
| National Physical Laboratory (NPL) | Ministry of Science & Technology (MoST) | — | Delhi |
| National Productivity Council (NPC) | Ministry of Commerce and Industry | — | Delhi |
| National Product Ltd. | — | — | Delhi |
| National Pulses Research Centre Pudukkottai | — | — | Tamil Nadu |
| National Remote Sensing Centre (NRSC), Hyderabad | Ministry of Science & Technology (MoST) | Research Institutions | Telangana |
| National Research Centre for Banana (NRCB) | Ministry of Agriculture and Farmers Welfare (MoAFW) | — | Tamil Nadu |
| National Research Centre for Equines (NRCE) | Ministry of Agriculture and Farmers Welfare (MoAFW) | — | Haryana |
| National Research Centre for Grapes (NRCG) | Ministry of Agriculture and Farmers Welfare (MoAFW) | — | Maharashtra |
| National Research Centre for Integrated Pest Management (NCIPM) | Ministry of Agriculture and Farmers Welfare (MoAFW) | — | Delhi |
| National Research Centre for Orchids (NRCO) | Ministry of Agriculture and Farmers Welfare (MoAFW) | — | Sikkim |
| National Research Centre on Camel (NRCC) | Ministry of Agriculture and Farmers Welfare (MoAFW) | — | Rajasthan |
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